2021-07-27 12:00:20,971 - pegasus.tools.graph_operations - INFO - Function 'construct_graph' finished in 13.24s.
2021-07-27 12:07:40,261 - pegasus.tools.clustering - INFO - Louvain clustering is done. Get 26 clusters.
2021-07-27 12:07:40,768 - pegasus.tools.clustering - INFO - Function 'louvain' finished in 453.05s.
2021-07-27 12:07:40,770 - pegasus.tools.nearest_neighbors - INFO - Found cached kNN results, no calculation is required.
2021-07-27 12:07:40,771 - pegasus.tools.nearest_neighbors - INFO - Function 'get_neighbors' finished in 0.00s.
2021-07-27 12:07:40,879 - pegasus.tools.visualization - INFO - UMAP(dens_frac=0.0, dens_lambda=0.0, min_dist=0.5, random_state=0, verbose=True)
2021-07-27 12:07:40,882 - pegasus.tools.visualization - INFO - Construct fuzzy simplicial set
2021-07-27 12:07:46,841 - pegasus.tools.visualization - INFO - Construct embedding
completed 0 / 200 epochs
completed 20 / 200 epochs
completed 40 / 200 epochs
completed 60 / 200 epochs
completed 80 / 200 epochs
completed 100 / 200 epochs
completed 120 / 200 epochs
completed 140 / 200 epochs
completed 160 / 200 epochs
completed 180 / 200 epochs
2021-07-27 12:14:18,831 - pegasus.tools.visualization - INFO - Function 'umap' finished in 398.06s.